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Difference between revisions of "TSS:Mm 100587.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Mct4=
 
|Mct4=
|all_trans=AK169917:0 AK165596:13 ENSMUST00000168579.7:-20 AK171260:-20 AK166048:-20 ENSMUST00000129473.7:-30 AK141381:-30 ENSMUST00000100130.9:-34 NM_001038654:-34 NM_001038653:-34 AK149707:-34 AK149983:-34 ENSMUST00000154187.7:-48
+
|all_trans=MGI:1933438
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 23: Line 23:
 
|nearest_refseq=NM_030696
 
|nearest_refseq=NM_030696
 
|nearest_unigene=Mm.28632
 
|nearest_unigene=Mm.28632
|num_trans=13
+
|num_trans=80879
 
|species=mouse
 
|species=mouse
 
|start=120949100
 
|start=120949100

Latest revision as of 10:41, 26 July 2021

Basic information about the TSS


TSS ID:mm_100587.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120949100
End:120949114
Strand:+
TSS Score:1
Start of the center position in the TSS region:120949107
End of the center position in the TSS region:120949108



Gene and protein annotation


Transcript_name:AK169917
Distance:0
GeneID:80879
HGNC/MGI_ID:MGI:1933438
UniProt_ID:
Gene_name:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene_symbol:Slc16a3
Gene_synonyms:MCT3 MCT4 monocarboxylate_transporter_4
Gene_source:MGI:1933438



Transcript annotation


Transcript_name:AK169917
Distance:0
Num_trans:80879
All_trans:MGI:1933438



TATA-Box annotation


Distance to TSS:40
Nearest PromoterID:NM_001038653
Entrez ID:80879
Nearest Unigene:Mm.28632
Nearest Refseq:NM_030696
Nearest Ensembl:ENSMUSG00000025161
Gene Name:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene Alias:Mct3|Mct4
Gene Description:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene Type:protein-coding
CpG%:0.14
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):