Difference between revisions of "TSS:Mm 100612.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK054343:0 AK041464:0 BC059843:0 ENSMUST00000103013.9:-25 NM_029878:-25 uc007mvy.2:-25 AK050199:-25 |chr=chr11 |cpg_percent=0.09 |distance=0 |distance_t...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |A030005L14Rik= |
| + | |all_trans=MGI:1919686 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=14 |
|end=121452036 | |end=121452036 | ||
| + | |end_of_center_position=121452005 | ||
|entrez_id=108903 | |entrez_id=108903 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=2310057L06Rik | + | |gene_alias=2310057L06Rik{{!}}A030005L14Rik{{!}}mKIAA0988 |
|gene_description=tubulin-specific chaperone d | |gene_description=tubulin-specific chaperone d | ||
|gene_id=108903 | |gene_id=108903 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1919686 | |hgnc_mgi_id=MGI:1919686 | ||
| + | |mKIAA0988= | ||
|nearest_ensembl=ENSMUSG00000039230 | |nearest_ensembl=ENSMUSG00000039230 | ||
|nearest_promoter_id=NM_029878 | |nearest_promoter_id=NM_029878 | ||
|nearest_refseq=NM_029878 | |nearest_refseq=NM_029878 | ||
|nearest_unigene=Mm.23686 | |nearest_unigene=Mm.23686 | ||
| − | |num_trans= | + | |num_trans=108903 |
|species=mouse | |species=mouse | ||
|start=121451973 | |start=121451973 | ||
| + | |start_of_center_position=121452004 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK054343 AK041464 BC059843 | |transcript_name=AK054343 AK041464 BC059843 | ||
| Line 29: | Line 33: | ||
|tss_id=mm_100612.1 | |tss_id=mm_100612.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8BYA0 |
}} | }} | ||
Latest revision as of 10:42, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 121452004 |
|---|---|
| End of the center position in the TSS region: | 121452005 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK054343 AK041464 BC059843 |
|---|---|
| Distance: | 0 |
| Num_trans: | 108903 |
| All_trans: | MGI:1919686 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_029878 |
| Entrez ID: | 108903 |
| Nearest Unigene: | Mm.23686 |
| Nearest Refseq: | NM_029878 |
| Nearest Ensembl: | ENSMUSG00000039230 |
| Gene Name: | tubulin-specific chaperone d |
| Gene Alias: | 2310057L06Rik|A030005L14Rik|mKIAA0988 |
| Gene Description: | tubulin-specific chaperone d |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
