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Difference between revisions of "TSS:Mm 100621.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000151666.1:0 AK075908:32 ENSMUST00000139414.7:-75 AK020695:-75 AK197281:309
+
|all_trans=MGI:1919686
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_178664
 
|nearest_refseq=NM_178664
 
|nearest_unigene=Mm.386847
 
|nearest_unigene=Mm.386847
|num_trans=5
+
|num_trans=108903
 
|species=mouse
 
|species=mouse
 
|start=121601693
 
|start=121601693

Latest revision as of 10:42, 26 July 2021

Basic information about the TSS


TSS ID:mm_100621.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:121601693
End:121601710
Strand:+
TSS Score:1
Start of the center position in the TSS region:121601701
End of the center position in the TSS region:121601702



Gene and protein annotation


Transcript_name:ENSMUST00000151666.1
Distance:0
GeneID:108903
HGNC/MGI_ID:MGI:1919686
UniProt_ID:
Gene_name:tubulin-specific chaperone d
Gene_symbol:Tbcd
Gene_synonyms:2310057L06Rik A030005L14Rik
Gene_source:MGI:1919686



Transcript annotation


Transcript_name:ENSMUST00000151666.1
Distance:0
Num_trans:108903
All_trans:MGI:1919686



TATA-Box annotation


Distance to TSS:71449
Nearest PromoterID:NM_178664
Entrez ID:210004
Nearest Unigene:Mm.386847
Nearest Refseq:NM_178664
Nearest Ensembl:ENSMUSG00000046605
Gene Name:tubulin-specific chaperone d
Gene Alias:6030413G23Rik
Gene Description:UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.472637
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):