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Difference between revisions of "TSS:Mm 100628.1"

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(Created page with "{{TSSDetail |all_trans=BC019776:-120 AK170055:146 ENSMUST00000125580.1:147 BC026646:-147 AK171200:147 NM_144797:-165 uc007mwd.1:-165 uc011yjn.1:-165 AK053718:-165 AK170549:-16...")
 
 
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{{TSSDetail
 
{{TSSDetail
|all_trans=BC019776:-120 AK170055:146 ENSMUST00000125580.1:147 BC026646:-147 AK171200:147 NM_144797:-165 uc007mwd.1:-165 uc011yjn.1:-165 AK053718:-165 AK170549:-165 AK170800:-165 AK085880:-165 AK034855:-165 BC024445:-180 ENSMUST00000036742.13:-181
+
|BC019776=
 +
|all_trans=MGI:2384806
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 6: Line 7:
 
|distance_to_tss=177
 
|distance_to_tss=177
 
|end=121702616
 
|end=121702616
 +
|end_of_center_position=121702604
 
|entrez_id=210029
 
|entrez_id=210029
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=9430048M07Rik|BC019776
+
|gene_alias=9430048M07Rik{{!}}BC019776
|gene_description="meteorin, glial cell differentiation regulator-like"
+
|gene_description=meteorin, glial cell differentiation regulator-like
 
|gene_id=210029
 
|gene_id=210029
|gene_name="meteorin, glial cell differentiation regulator-like"
+
|gene_name=meteorin, glial cell differentiation regulator-like
 
|gene_source=MGI:2384806
 
|gene_source=MGI:2384806
 
|gene_symbol=Metrnl
 
|gene_symbol=Metrnl
Line 21: Line 23:
 
|nearest_refseq=NM_144797
 
|nearest_refseq=NM_144797
 
|nearest_unigene=Mm.153566
 
|nearest_unigene=Mm.153566
|num_trans=15
+
|num_trans=210029
 
|species=mouse
 
|species=mouse
 
|start=121702591
 
|start=121702591
 +
|start_of_center_position=121702603
 
|strand=+
 
|strand=+
 
|transcript_name=BC019776
 
|transcript_name=BC019776

Latest revision as of 10:42, 26 July 2021

Basic information about the TSS


TSS ID:mm_100628.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:121702591
End:121702616
Strand:+
TSS Score:1
Start of the center position in the TSS region:121702603
End of the center position in the TSS region:121702604



Gene and protein annotation


Transcript_name:BC019776
Distance:-120
GeneID:210029
HGNC/MGI_ID:MGI:2384806
UniProt_ID:
Gene_name:meteorin, glial cell differentiation regulator-like
Gene_symbol:Metrnl
Gene_synonyms:9430048M07Rik
Gene_source:MGI:2384806



Transcript annotation


Transcript_name:BC019776
Distance:-120
Num_trans:210029
All_trans:MGI:2384806



TATA-Box annotation


Distance to TSS:177
Nearest PromoterID:NM_144797
Entrez ID:210029
Nearest Unigene:Mm.153566
Nearest Refseq:NM_144797
Nearest Ensembl:ENSMUSG00000039208
Gene Name:meteorin, glial cell differentiation regulator-like
Gene Alias:9430048M07Rik|BC019776
Gene Description:meteorin, glial cell differentiation regulator-like
Gene Type:protein-coding
CpG%:0.13
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):