Difference between revisions of "TSS:Mm 100649.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000133882.1:0 ENSMUST00000146888.1:-330 |chr=chr11 |cpg_percent=0.005 |distance=0 |distance_to_tss=22351 |end=3146392 |entrez_id=236604 |gc_per...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1926137 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22370 |
|end=3146392 | |end=3146392 | ||
| + | |end_of_center_position=3146372 | ||
|entrez_id=236604 | |entrez_id=236604 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=phosphatidylserine decarboxylase, pseudogene 1 |
|gene_id=78887 | |gene_id=78887 | ||
| − | |gene_name= | + | |gene_name=Sfi1 homolog, spindle assembly associated (yeast) |
|gene_source=MGI:1926137 | |gene_source=MGI:1926137 | ||
|gene_symbol=Sfi1 | |gene_symbol=Sfi1 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001004146 | |nearest_refseq=NM_001004146 | ||
|nearest_unigene=Mm.247625 | |nearest_unigene=Mm.247625 | ||
| − | |num_trans= | + | |num_trans=78887 |
|species=mouse | |species=mouse | ||
|start=3146351 | |start=3146351 | ||
| + | |start_of_center_position=3146371 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000133882.1 | |transcript_name=ENSMUST00000133882.1 | ||
Latest revision as of 10:43, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3146371 |
|---|---|
| End of the center position in the TSS region: | 3146372 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000133882.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 78887 |
| All_trans: | MGI:1926137 |
TATA-Box annotation
| Distance to TSS: | 22370 |
|---|---|
| Nearest PromoterID: | NR_003517 |
| Entrez ID: | 236604 |
| Nearest Unigene: | Mm.247625 |
| Nearest Refseq: | NM_001004146 |
| Nearest Ensembl: | |
| Gene Name: | Sfi1 homolog, spindle assembly associated (yeast) |
| Gene Alias: | - |
| Gene Description: | phosphatidylserine decarboxylase, pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.005 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
