Difference between revisions of "TSS:Mm 100660.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC039649:-47 AK080814:-50 NM_007879:-53 uc007hsh.1:-53 uc007hsi.1:-53 D10715:-53 AK144438:-54 ENSMUST00000166162.7:-59 ENSMUST00000020741.11:-60 ENSMUST...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI132520= |
| + | |Nedd3= | ||
| + | |all_trans=MGI:1343297 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-47 | |distance=-47 | ||
| − | |distance_to_tss= | + | |distance_to_tss=135 |
|end=3266333 | |end=3266333 | ||
| + | |end_of_center_position=3266328 | ||
|entrez_id=13494 | |entrez_id=13494 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AA408859 | + | |gene_alias=AA408859{{!}}AI132520{{!}}DRG-1{{!}}NEDD-3{{!}}Nedd3 |
|gene_description=developmentally regulated GTP binding protein 1 | |gene_description=developmentally regulated GTP binding protein 1 | ||
|gene_id=13494 | |gene_id=13494 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_007879 | |nearest_refseq=NM_007879 | ||
|nearest_unigene=Mm.3250 | |nearest_unigene=Mm.3250 | ||
| − | |num_trans= | + | |num_trans=13494 |
|species=mouse | |species=mouse | ||
|start=3266322 | |start=3266322 | ||
| + | |start_of_center_position=3266327 | ||
|strand=- | |strand=- | ||
|transcript_name=BC039649 | |transcript_name=BC039649 | ||
Latest revision as of 10:43, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3266327 |
|---|---|
| End of the center position in the TSS region: | 3266328 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC039649 |
|---|---|
| Distance: | -47 |
| Num_trans: | 13494 |
| All_trans: | MGI:1343297 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NM_007879 |
| Entrez ID: | 13494 |
| Nearest Unigene: | Mm.3250 |
| Nearest Refseq: | NM_007879 |
| Nearest Ensembl: | ENSMUSG00000020457 |
| Gene Name: | developmentally regulated GTP binding protein 1 |
| Gene Alias: | AA408859|AI132520|DRG-1|NEDD-3|Nedd3 |
| Gene Description: | developmentally regulated GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
