Difference between revisions of "TSS:Mm 100673.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1197517 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_010718 | |nearest_refseq=NM_010718 | ||
|nearest_unigene=Mm.124176 | |nearest_unigene=Mm.124176 | ||
| − | |num_trans= | + | |num_trans=16886 |
|species=mouse | |species=mouse | ||
|start=3371307 | |start=3371307 | ||
|start_of_center_position=3371358 | |start_of_center_position=3371358 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000101640.9 ENSMUST00000101642.9 ENSMUST00000134576.7 ENSMUST00000147344.1 | + | |transcript_name=ENSMUST00000101640.9 ENSMUST00000101642.9 ENSMUST00000134576.7 ENSMUST00000147344.1 BC086629 AK146099 AB005132 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100673.1 | |tss_id=mm_100673.1 | ||
Latest revision as of 10:43, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3371358 |
|---|---|
| End of the center position in the TSS region: | 3371359 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000101640.9 ENSMUST00000101642.9 ENSMUST00000134576.7 ENSMUST00000147344.1 BC086629 AK146099 AB005132 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16886 |
| All_trans: | MGI:1197517 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_173053 |
| Entrez ID: | 16886 |
| Nearest Unigene: | Mm.124176 |
| Nearest Refseq: | NM_010718 |
| Nearest Ensembl: | ENSMUSG00000020451 |
| Gene Name: | LIM motif-containing protein kinase 2 |
| Gene Alias: | Limk-2|whe |
| Gene Description: | LIM motif-containing protein kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
