Difference between revisions of "TSS:Mm 10070.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK032775:0 |chr=chr1 |cpg_percent=0.035 |distance=0 |distance_to_tss=1044 |end=194620881 |entrez_id=18845 |gc_percent=0.58209 |gene_alias=2810428A13Rik|...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AA589422= |
| + | |AW457381= | ||
| + | |OCT= | ||
| + | |PlexA2= | ||
| + | |Plxn2= | ||
| + | |all_trans=MGI:3648997 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=1044 | |distance_to_tss=1044 | ||
|end=194620881 | |end=194620881 | ||
| + | |end_of_center_position=194620873 | ||
|entrez_id=18845 | |entrez_id=18845 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=2810428A13Rik | + | |gene_alias=2810428A13Rik{{!}}AA589422{{!}}AW457381{{!}}OCT{{!}}PlexA2{{!}}Plxn2{{!}}mKIAA0463 |
|gene_description=plexin A2 | |gene_description=plexin A2 | ||
|gene_id=623172 | |gene_id=623172 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3648997 | |hgnc_mgi_id=MGI:3648997 | ||
| + | |mKIAA0463= | ||
|nearest_ensembl=ENSMUSG00000026640 | |nearest_ensembl=ENSMUSG00000026640 | ||
|nearest_promoter_id=NM_008882 | |nearest_promoter_id=NM_008882 | ||
|nearest_refseq=NM_008882 | |nearest_refseq=NM_008882 | ||
|nearest_unigene=Mm.2251 | |nearest_unigene=Mm.2251 | ||
| − | |num_trans= | + | |num_trans=623172 |
|species=mouse | |species=mouse | ||
|start=194620864 | |start=194620864 | ||
| + | |start_of_center_position=194620872 | ||
|strand=- | |strand=- | ||
|transcript_name=AK032775 | |transcript_name=AK032775 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 194620872 |
|---|---|
| End of the center position in the TSS region: | 194620873 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK032775 |
|---|---|
| Distance: | 0 |
| Num_trans: | 623172 |
| All_trans: | MGI:3648997 |
TATA-Box annotation
| Distance to TSS: | 1044 |
|---|---|
| Nearest PromoterID: | NM_008882 |
| Entrez ID: | 18845 |
| Nearest Unigene: | Mm.2251 |
| Nearest Refseq: | NM_008882 |
| Nearest Ensembl: | ENSMUSG00000026640 |
| Gene Name: | predicted gene 6403 |
| Gene Alias: | 2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463 |
| Gene Description: | plexin A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
