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Difference between revisions of "TSS:Mm 100702.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK033381:0 AK083955:-9 AK048213:-18 AK049839:-18 ENSMUST00000153313.8:-22 AK165129:-22 AK162835:-25 ENSMUST00000132077.3:-28 NR_002322:-28 NR_110490:-28 DQ517434:-28 BC048828:60 ENSMUST00000184580.1:147 ENSMUST00000226545.1:190 ENSMUST00000227137.1:340 ENSMUST00000226724.1:-398 ENSMUST00000183605.1:443
+
|all_trans=MGI:2144114
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NR_002321
 
|nearest_refseq=NR_002321
 
|nearest_unigene=Mm.390314
 
|nearest_unigene=Mm.390314
|num_trans=17
+
|num_trans=544752
 
|species=mouse
 
|species=mouse
 
|start=3647471
 
|start=3647471

Latest revision as of 10:44, 26 July 2021

Basic information about the TSS


TSS ID:mm_100702.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:3647471
End:3647508
Strand:-
TSS Score:1
Start of the center position in the TSS region:3647489
End of the center position in the TSS region:3647490



Gene and protein annotation


Transcript_name:AK033381
Distance:0
GeneID:544752
HGNC/MGI_ID:MGI:2144114
UniProt_ID:
Gene_name:taurine upregulated gene 1
Gene_symbol:Tug1
Gene_synonyms:
Gene_source:MGI:2144114



Transcript annotation


Transcript_name:AK033381
Distance:0
Num_trans:544752
All_trans:MGI:2144114



TATA-Box annotation


Distance to TSS:46
Nearest PromoterID:NR_002322
Entrez ID:544752
Nearest Unigene:Mm.390314
Nearest Refseq:NR_002321
Nearest Ensembl:ENSMUSG00000056579
Gene Name:taurine upregulated gene 1
Gene Alias:AI316828
Gene Description:taurine upregulated gene 1
Gene Type:ncRNA
CpG%:0.005
GC%:0.318408
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):