Difference between revisions of "TSS:Mm 100704.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=DQ517435:-78 ENSMUST00000144852.1:-82 NR_002321:-84 uc007htk.2:-84 AK088174:-84 ENSMUST00000182330.1:-312 DQ685326:407 |chr=chr11 |cpg_percent=0.17 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2144114 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=89 | |distance_to_tss=89 | ||
|end=3648730 | |end=3648730 | ||
| + | |end_of_center_position=3648726 | ||
|entrez_id=544752 | |entrez_id=544752 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_002321 | |nearest_refseq=NR_002321 | ||
|nearest_unigene=Mm.390314 | |nearest_unigene=Mm.390314 | ||
| − | |num_trans= | + | |num_trans=544752 |
|species=mouse | |species=mouse | ||
|start=3648720 | |start=3648720 | ||
| + | |start_of_center_position=3648725 | ||
|strand=- | |strand=- | ||
|transcript_name=DQ517435 | |transcript_name=DQ517435 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3648725 |
|---|---|
| End of the center position in the TSS region: | 3648726 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ517435 |
|---|---|
| Distance: | -78 |
| Num_trans: | 544752 |
| All_trans: | MGI:2144114 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NR_002321 |
| Entrez ID: | 544752 |
| Nearest Unigene: | Mm.390314 |
| Nearest Refseq: | NR_002321 |
| Nearest Ensembl: | ENSMUSG00000056579 |
| Gene Name: | taurine upregulated gene 1 |
| Gene Alias: | AI316828 |
| Gene Description: | taurine upregulated gene 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.17 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
