Difference between revisions of "TSS:Mm 100709.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000102950.9:0 ENSMUST00000101632.3:0 BC031794:0 AK044598:0 BC051185:0 BC058602:0 NM_001302630:-5 NM_001302631:-5 uc007hto.2:-5 uc011xqr.2:-5 |c...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C630001G20Rik= |
| + | |Gm244= | ||
| + | |ORP-4= | ||
| + | |OSBPL1= | ||
| + | |all_trans=MGI:1921559 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=3722222 | |end=3722222 | ||
| + | |end_of_center_position=3722206 | ||
|entrez_id=74309 | |entrez_id=74309 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=1700095P05Rik | + | |gene_alias=1700095P05Rik{{!}}C630001G20Rik{{!}}Gm244{{!}}ORP-4{{!}}OSBPL1 |
|gene_description=oxysterol binding protein 2 | |gene_description=oxysterol binding protein 2 | ||
|gene_id=74309 | |gene_id=74309 | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=MGI:1921559 | |hgnc_mgi_id=MGI:1921559 | ||
|nearest_ensembl=ENSMUSG00000020435 | |nearest_ensembl=ENSMUSG00000020435 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001302630 |
|nearest_refseq=NM_152818 | |nearest_refseq=NM_152818 | ||
|nearest_unigene=Mm.61022 | |nearest_unigene=Mm.61022 | ||
| − | |num_trans= | + | |num_trans=74309 |
|species=mouse | |species=mouse | ||
|start=3722189 | |start=3722189 | ||
| + | |start_of_center_position=3722205 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000102950.9 ENSMUST00000101632.3 BC031794 AK044598 BC051185 BC058602 | |transcript_name=ENSMUST00000102950.9 ENSMUST00000101632.3 BC031794 AK044598 BC051185 BC058602 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3722205 |
|---|---|
| End of the center position in the TSS region: | 3722206 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102950.9 ENSMUST00000101632.3 BC031794 AK044598 BC051185 BC058602 |
|---|---|
| Distance: | 0 |
| Num_trans: | 74309 |
| All_trans: | MGI:1921559 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_001302630 |
| Entrez ID: | 74309 |
| Nearest Unigene: | Mm.61022 |
| Nearest Refseq: | NM_152818 |
| Nearest Ensembl: | ENSMUSG00000020435 |
| Gene Name: | oxysterol binding protein 2 |
| Gene Alias: | 1700095P05Rik|C630001G20Rik|Gm244|ORP-4|OSBPL1 |
| Gene Description: | oxysterol binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
