Difference between revisions of "TSS:Mm 100715.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000070552.13:-17 ENSMUST00000135250.1:-17 NM_152818:-17 uc007htq.1:-17 uc007htr.1:-17 AK049816:-17 |chr=chr11 |cpg_percent=0.125 |distance=-17...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C630001G20Rik= |
| + | |Gm244= | ||
| + | |ORP-4= | ||
| + | |OSBPL1= | ||
| + | |all_trans=MGI:1921559 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=25 | |distance_to_tss=25 | ||
|end=3863886 | |end=3863886 | ||
| + | |end_of_center_position=3863878 | ||
|entrez_id=74309 | |entrez_id=74309 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=1700095P05Rik | + | |gene_alias=1700095P05Rik{{!}}C630001G20Rik{{!}}Gm244{{!}}ORP-4{{!}}OSBPL1 |
|gene_description=oxysterol binding protein 2 | |gene_description=oxysterol binding protein 2 | ||
|gene_id=74309 | |gene_id=74309 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_152818 | |nearest_refseq=NM_152818 | ||
|nearest_unigene=Mm.61022 | |nearest_unigene=Mm.61022 | ||
| − | |num_trans= | + | |num_trans=74309 |
|species=mouse | |species=mouse | ||
|start=3863869 | |start=3863869 | ||
| + | |start_of_center_position=3863877 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000070552.13 ENSMUST00000135250 | + | |transcript_name=ENSMUST00000070552.13 ENSMUST00000135250.1 AK049816 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100715.1 | |tss_id=mm_100715.1 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3863877 |
|---|---|
| End of the center position in the TSS region: | 3863878 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000070552.13 ENSMUST00000135250.1 AK049816 |
|---|---|
| Distance: | -17 |
| Num_trans: | 74309 |
| All_trans: | MGI:1921559 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_152818 |
| Entrez ID: | 74309 |
| Nearest Unigene: | Mm.61022 |
| Nearest Refseq: | NM_152818 |
| Nearest Ensembl: | ENSMUSG00000020435 |
| Gene Name: | oxysterol binding protein 2 |
| Gene Alias: | 1700095P05Rik|C630001G20Rik|Gm244|ORP-4|OSBPL1 |
| Gene Description: | oxysterol binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
