Difference between revisions of "TSS:Mm 100719.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_026150 | + | |all_trans=NM_026150:16 AK081396:29 ENSMUST00000020712.4:44 AK015005:44 AK006513:44 AK049235:47 BC048445:47 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_026150 | |nearest_refseq=NM_026150 | ||
|nearest_unigene=Mm.347950 | |nearest_unigene=Mm.347950 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=3895141 | |start=3895141 | ||
|start_of_center_position=3895153 | |start_of_center_position=3895153 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_026150 | + | |transcript_name=NM_026150.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100719.1 | |tss_id=mm_100719.1 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3895153 |
|---|---|
| End of the center position in the TSS region: | 3895154 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_026150.3 |
|---|---|
| Distance: | 16 |
| Num_trans: | 7 |
| All_trans: | NM_026150:16 AK081396:29 ENSMUST00000020712.4:44 AK015005:44 AK006513:44 AK049235:47 BC048445:47 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_026150 |
| Entrez ID: | 67430 |
| Nearest Unigene: | Mm.347950 |
| Nearest Refseq: | NM_026150 |
| Nearest Ensembl: | ENSMUSG00000020434 |
| Gene Name: | RIKEN cDNA 4921536K21 gene |
| Gene Alias: | AV043724 |
| Gene Description: | RIKEN cDNA 4921536K21 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
