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Difference between revisions of "TSS:Mm 100722.1"

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Line 2: Line 2:
 
|AI414849=
 
|AI414849=
 
|AI536442=
 
|AI536442=
|all_trans=BC095957:-29 BC020181:72 AK205099:128 AB341349:325 AK195689:426
+
|all_trans=MGI:2144150
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_153142
 
|nearest_refseq=NM_153142
 
|nearest_unigene=Mm.171514
 
|nearest_unigene=Mm.171514
|num_trans=5
+
|num_trans=103710
 
|species=mouse
 
|species=mouse
 
|start=3913769
 
|start=3913769

Latest revision as of 10:44, 26 July 2021

Basic information about the TSS


TSS ID:mm_100722.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:3913769
End:3913792
Strand:-
TSS Score:1
Start of the center position in the TSS region:3913780
End of the center position in the TSS region:3913781



Gene and protein annotation


Transcript_name:BC095957
Distance:-29
GeneID:103710
HGNC/MGI_ID:MGI:2144150
UniProt_ID:Q501N1
Gene_name:solute carrier family 35, member E4
Gene_symbol:Slc35e4
Gene_synonyms:A330108F03Rik
Gene_source:MGI:2144150



Transcript annotation


Transcript_name:BC095957
Distance:-29
Num_trans:103710
All_trans:MGI:2144150



TATA-Box annotation


Distance to TSS:883
Nearest PromoterID:NM_153142
Entrez ID:103710
Nearest Unigene:Mm.171514
Nearest Refseq:NM_153142
Nearest Ensembl:ENSMUSG00000048807
Gene Name:solute carrier family 35, member E4
Gene Alias:A330108F03Rik|AI414849|AI536442
Gene Description:solute carrier family 35, member E4
Gene Type:protein-coding
CpG%:0.105
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):