Difference between revisions of "TSS:Mm 100728.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Tcn-2= |
| + | |all_trans=MGI:98534 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=403 | |distance_to_tss=403 | ||
|end=3931570 | |end=3931570 | ||
| + | |end_of_center_position=3931558 | ||
|entrez_id=21452 | |entrez_id=21452 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=AW208754 | + | |gene_alias=AW208754{{!}}Tcn-2 |
|gene_description=transcobalamin 2 | |gene_description=transcobalamin 2 | ||
|gene_id=21452 | |gene_id=21452 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_015749 | |nearest_refseq=NM_015749 | ||
|nearest_unigene=Mm.20948 | |nearest_unigene=Mm.20948 | ||
| − | |num_trans= | + | |num_trans=21452 |
|species=mouse | |species=mouse | ||
|start=3931545 | |start=3931545 | ||
| + | |start_of_center_position=3931557 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK197212 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100728.1 | |tss_id=mm_100728.1 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3931557 |
|---|---|
| End of the center position in the TSS region: | 3931558 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK197212 |
|---|---|
| Distance: | -6 |
| Num_trans: | 21452 |
| All_trans: | MGI:98534 |
TATA-Box annotation
| Distance to TSS: | 403 |
|---|---|
| Nearest PromoterID: | NM_001130459 |
| Entrez ID: | 21452 |
| Nearest Unigene: | Mm.20948 |
| Nearest Refseq: | NM_015749 |
| Nearest Ensembl: | ENSMUSG00000020432 |
| Gene Name: | transcobalamin 2 |
| Gene Alias: | AW208754|Tcn-2 |
| Gene Description: | transcobalamin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
