Difference between revisions of "TSS:Mm 100730.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Tcn-2= | |Tcn-2= | ||
| − | |all_trans= | + | |all_trans=MGI:98534 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015749 | |nearest_refseq=NM_015749 | ||
|nearest_unigene=Mm.20948 | |nearest_unigene=Mm.20948 | ||
| − | |num_trans= | + | |num_trans=21452 |
|species=mouse | |species=mouse | ||
|start=3931791 | |start=3931791 | ||
Latest revision as of 10:44, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3931803 |
|---|---|
| End of the center position in the TSS region: | 3931804 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109988.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21452 |
| All_trans: | MGI:98534 |
TATA-Box annotation
| Distance to TSS: | 157 |
|---|---|
| Nearest PromoterID: | NM_001130459 |
| Entrez ID: | 21452 |
| Nearest Unigene: | Mm.20948 |
| Nearest Refseq: | NM_015749 |
| Nearest Ensembl: | ENSMUSG00000020432 |
| Gene Name: | transcobalamin 2 |
| Gene Alias: | AW208754|Tcn-2 |
| Gene Description: | transcobalamin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 51(GGGTCTTTAAAG,-,0.00),52(GGTCTTTAAAGC,-,0.00),53(GTCTTTAAAGCG,+,0.00) |
