Personal tools

Difference between revisions of "TSS:Mm 100747.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK143216:0 AK076934:0 ENSMUST00000139099.7:1 ENSMUST00000133962.7:1 ENSMUST00000132712.1:-21 AK161195:-41 AK220409:-43 ENSMUST00000093381.10:-60 ENSMUST00000101626.8:-62 NM_177616:-62 NM_001164620:-62 uc007hul.1:-62 uc007hum.1:-62 uc007hun.2:-62 AK133165:-62
+
|all_trans=MGI:3041210
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 9: Line 9:
 
|entrez_id=216516
 
|entrez_id=216516
 
|gc_percent=0.626866
 
|gc_percent=0.626866
|gene_alias=4930562D19Rik
+
|gene_alias=4930562D19Rik{{!}}mKIAA1656
 
|gene_description=coiled-coil domain containing 157
 
|gene_description=coiled-coil domain containing 157
 
|gene_id=216516
 
|gene_id=216516
Line 23: Line 23:
 
|nearest_refseq=NM_177616
 
|nearest_refseq=NM_177616
 
|nearest_unigene=Mm.386854
 
|nearest_unigene=Mm.386854
|num_trans=15
+
|num_trans=216516
 
|species=mouse
 
|species=mouse
 
|start=4160218
 
|start=4160218

Latest revision as of 10:45, 26 July 2021

Basic information about the TSS


TSS ID:mm_100747.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:4160218
End:4160231
Strand:-
TSS Score:1
Start of the center position in the TSS region:4160224
End of the center position in the TSS region:4160225



Gene and protein annotation


Transcript_name:AK143216 AK076934
Distance:0
GeneID:216516
HGNC/MGI_ID:MGI:3041210
UniProt_ID:
Gene_name:coiled-coil domain containing 157
Gene_symbol:Ccdc157
Gene_synonyms:4930562D19Rik
Gene_source:MGI:3041210



Transcript annotation


Transcript_name:AK143216 AK076934
Distance:0
Num_trans:216516
All_trans:MGI:3041210



TATA-Box annotation


Distance to TSS:68
Nearest PromoterID:NM_177616
Entrez ID:216516
Nearest Unigene:Mm.386854
Nearest Refseq:NM_177616
Nearest Ensembl:ENSMUSG00000051427
Gene Name:coiled-coil domain containing 157
Gene Alias:4930562D19Rik|mKIAA1656
Gene Description:coiled-coil domain containing 157
Gene Type:protein-coding
CpG%:0.07
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):