Difference between revisions of "TSS:Mm 100750.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3649806 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-5128 | |distance_to_tss=-5128 | ||
|end=4231658 | |end=4231658 | ||
| + | |end_of_center_position=4231657 | ||
|entrez_id=18413 | |entrez_id=18413 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001013365 | |nearest_refseq=NM_001013365 | ||
|nearest_unigene=Mm.131422 | |nearest_unigene=Mm.131422 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=4231655 | |start=4231655 | ||
| + | |start_of_center_position=4231656 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(TACTATAAAGGC,-,0.00) |
|transcript_name=ENSMUST00000119525.1 | |transcript_name=ENSMUST00000119525.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:45, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 4231656 |
|---|---|
| End of the center position in the TSS region: | 4231657 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000119525.1 |
|---|---|
| Distance: | 391 |
| Num_trans: | |
| All_trans: | MGI:3649806 |
TATA-Box annotation
| Distance to TSS: | -5128 |
|---|---|
| Nearest PromoterID: | NM_001013365 |
| Entrez ID: | 18413 |
| Nearest Unigene: | Mm.131422 |
| Nearest Refseq: | NM_001013365 |
| Nearest Ensembl: | ENSMUSG00000058755 |
| Gene Name: | predicted gene 11956 |
| Gene Alias: | OncoM |
| Gene Description: | oncostatin M |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TACTATAAAGGC,-,0.00) |
