Difference between revisions of "TSS:Mm 100757.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1923078 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_029458 | |nearest_refseq=NM_029458 | ||
|nearest_unigene=Mm.159592 | |nearest_unigene=Mm.159592 | ||
| − | |num_trans= | + | |num_trans=75828 |
|species=mouse | |species=mouse | ||
|start=4427279 | |start=4427279 | ||
|start_of_center_position=4427284 | |start_of_center_position=4427284 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=78(CCTTTTCTACTC,+,0.00) |
|transcript_name=ENSMUST00000149443.1 | |transcript_name=ENSMUST00000149443.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:45, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4427284 |
|---|---|
| End of the center position in the TSS region: | 4427285 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000149443.1 |
|---|---|
| Distance: | 18 |
| Num_trans: | 75828 |
| All_trans: | MGI:1923078 |
TATA-Box annotation
| Distance to TSS: | 13797 |
|---|---|
| Nearest PromoterID: | NM_029458 |
| Entrez ID: | 75828 |
| Nearest Unigene: | Mm.159592 |
| Nearest Refseq: | NM_029458 |
| Nearest Ensembl: | ENSMUSG00000020419 |
| Gene Name: | HORMA domain containing 2 |
| Gene Alias: | 4930529M09Rik |
| Gene Description: | HORMA domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 78(CCTTTTCTACTC,+,0.00) |
