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Difference between revisions of "TSS:Mm 100788.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000053079.12:0 BC005442:0 AK045998:0 L28176:30 AK197717:37 ENSMUST00000109910.8:-63 KY442315:-63 NM_001252252:-71 NM_010898:-71 NM_001252250:-71 NM_001361675:-71 NM_001361677:-71 NM_001361676:-71 NM_001252251:-71 X74671:-75 ENSMUST00000164190.7:152 ENSMUST00000172305.1:221 L27090:351 L27105:351 L22987:357 L22988:357 L22989:357 ENSMUST00000056290.12:361
+
|all_trans=MGI:97307
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 22: Line 22:
 
|nearest_refseq=NM_010898
 
|nearest_refseq=NM_010898
 
|nearest_unigene=Mm.297109
 
|nearest_unigene=Mm.297109
|num_trans=23
+
|num_trans=18016
 
|species=mouse
 
|species=mouse
 
|start=4849345
 
|start=4849345

Latest revision as of 10:46, 26 July 2021

Basic information about the TSS


TSS ID:mm_100788.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:4849345
End:4849473
Strand:-
TSS Score:1
Start of the center position in the TSS region:4849409
End of the center position in the TSS region:4849410



Gene and protein annotation


Transcript_name:ENSMUST00000053079.12 BC005442 AK045998
Distance:0
GeneID:18016
HGNC/MGI_ID:MGI:97307
UniProt_ID:P46662 Q99K59
Gene_name:neurofibromin 2
Gene_symbol:Nf2
Gene_synonyms:merlin moesin-ezrin-radixin-like_protein schwannomin
Gene_source:MGI:97307



Transcript annotation


Transcript_name:ENSMUST00000053079.12 BC005442 AK045998
Distance:0
Num_trans:18016
All_trans:MGI:97307



TATA-Box annotation


Distance to TSS:135
Nearest PromoterID:NM_001361675
Entrez ID:18016
Nearest Unigene:Mm.297109
Nearest Refseq:NM_010898
Nearest Ensembl:ENSMUSG00000009073
Gene Name:neurofibromin 2
Gene Alias:merlin
Gene Description:neurofibromin 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):