Difference between revisions of "TSS:Mm 100788.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:97307 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=135 | |distance_to_tss=135 | ||
|end=4849473 | |end=4849473 | ||
| + | |end_of_center_position=4849410 | ||
|entrez_id=18016 | |entrez_id=18016 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| Line 11: | Line 12: | ||
|gene_description=neurofibromin 2 | |gene_description=neurofibromin 2 | ||
|gene_id=18016 | |gene_id=18016 | ||
| − | |gene_name= | + | |gene_name=neurofibromin 2 |
|gene_source=MGI:97307 | |gene_source=MGI:97307 | ||
|gene_symbol=Nf2 | |gene_symbol=Nf2 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:97307 | |hgnc_mgi_id=MGI:97307 | ||
|nearest_ensembl=ENSMUSG00000009073 | |nearest_ensembl=ENSMUSG00000009073 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361675 |
|nearest_refseq=NM_010898 | |nearest_refseq=NM_010898 | ||
|nearest_unigene=Mm.297109 | |nearest_unigene=Mm.297109 | ||
| − | |num_trans= | + | |num_trans=18016 |
|species=mouse | |species=mouse | ||
|start=4849345 | |start=4849345 | ||
| + | |start_of_center_position=4849409 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000053079.12 BC005442 AK045998 | |transcript_name=ENSMUST00000053079.12 BC005442 AK045998 | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4849409 |
|---|---|
| End of the center position in the TSS region: | 4849410 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000053079.12 BC005442 AK045998 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18016 |
| All_trans: | MGI:97307 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NM_001361675 |
| Entrez ID: | 18016 |
| Nearest Unigene: | Mm.297109 |
| Nearest Refseq: | NM_010898 |
| Nearest Ensembl: | ENSMUSG00000009073 |
| Gene Name: | neurofibromin 2 |
| Gene Alias: | merlin |
| Gene Description: | neurofibromin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
