Difference between revisions of "TSS:Mm 100799.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK122388:26 ENSMUST00000093369.4:-55 NM_010904:-55 uc007hvm.1:-55 BC168406:56 M35131:-104 |chr=chr11 |cpg_percent=0.09 |distance=26 |distance_to_tss=64...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |NF200= |
| + | |Nfh= | ||
| + | |all_trans=MGI:97309 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=64 | |distance_to_tss=64 | ||
|end=4948009 | |end=4948009 | ||
| + | |end_of_center_position=4948001 | ||
|entrez_id=380684 | |entrez_id=380684 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=NF-H | + | |gene_alias=NF-H{{!}}NF200{{!}}Nfh{{!}}mKIAA0845 |
| − | |gene_description= | + | |gene_description=neurofilament, heavy polypeptide |
|gene_id=380684 | |gene_id=380684 | ||
| − | |gene_name= | + | |gene_name=neurofilament, heavy polypeptide |
|gene_source=MGI:97309 | |gene_source=MGI:97309 | ||
|gene_symbol=Nefh | |gene_symbol=Nefh | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:97309 | |hgnc_mgi_id=MGI:97309 | ||
| + | |mKIAA0845= | ||
|nearest_ensembl=ENSMUSG00000020396 | |nearest_ensembl=ENSMUSG00000020396 | ||
|nearest_promoter_id=NM_010904 | |nearest_promoter_id=NM_010904 | ||
|nearest_refseq=NM_010904 | |nearest_refseq=NM_010904 | ||
|nearest_unigene=Mm.298283 | |nearest_unigene=Mm.298283 | ||
| − | |num_trans= | + | |num_trans=380684 |
|species=mouse | |species=mouse | ||
|start=4947991 | |start=4947991 | ||
| + | |start_of_center_position=4948000 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-32(GGATATAAAAGA,-,0.00) |
|transcript_name=AK122388 | |transcript_name=AK122388 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4948000 |
|---|---|
| End of the center position in the TSS region: | 4948001 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK122388 |
|---|---|
| Distance: | 26 |
| Num_trans: | 380684 |
| All_trans: | MGI:97309 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_010904 |
| Entrez ID: | 380684 |
| Nearest Unigene: | Mm.298283 |
| Nearest Refseq: | NM_010904 |
| Nearest Ensembl: | ENSMUSG00000020396 |
| Gene Name: | neurofilament, heavy polypeptide |
| Gene Alias: | NF-H|NF200|Nfh|mKIAA0845 |
| Gene Description: | neurofilament, heavy polypeptide |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GGATATAAAAGA,-,0.00) |
