Difference between revisions of "TSS:Mm 100804.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK208067:-442 |chr=chr11 |cpg_percent=0.08 |distance=-442 |distance_to_tss=3313 |end=5062034 |entrez_id=78926 |gc_percent=0.676617 |gene_alias=4930500E2...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |D0Jmb1= |
| + | |Gar22= | ||
| + | |TU-71.1= | ||
| + | |all_trans=MGI:1926176 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=3313 | |distance_to_tss=3313 | ||
|end=5062034 | |end=5062034 | ||
| + | |end_of_center_position=5062014 | ||
|entrez_id=78926 | |entrez_id=78926 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=4930500E24Rik | + | |gene_alias=4930500E24Rik{{!}}D0Jmb1{{!}}Gar22{{!}}TU-71.1 |
|gene_description=growth arrest-specific 2 like 1 | |gene_description=growth arrest-specific 2 like 1 | ||
|gene_id=78926 | |gene_id=78926 | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=MGI:1926176 | |hgnc_mgi_id=MGI:1926176 | ||
|nearest_ensembl=ENSMUSG00000034201 | |nearest_ensembl=ENSMUSG00000034201 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001190406 |
|nearest_refseq=NM_030228 | |nearest_refseq=NM_030228 | ||
|nearest_unigene=Mm.44591 | |nearest_unigene=Mm.44591 | ||
| − | |num_trans= | + | |num_trans=78926 |
|species=mouse | |species=mouse | ||
|start=5061993 | |start=5061993 | ||
| + | |start_of_center_position=5062013 | ||
|strand=- | |strand=- | ||
|transcript_name=AK208067 | |transcript_name=AK208067 | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5062013 |
|---|---|
| End of the center position in the TSS region: | 5062014 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK208067 |
|---|---|
| Distance: | -442 |
| Num_trans: | 78926 |
| All_trans: | MGI:1926176 |
TATA-Box annotation
| Distance to TSS: | 3313 |
|---|---|
| Nearest PromoterID: | NM_001190406 |
| Entrez ID: | 78926 |
| Nearest Unigene: | Mm.44591 |
| Nearest Refseq: | NM_030228 |
| Nearest Ensembl: | ENSMUSG00000034201 |
| Gene Name: | growth arrest-specific 2 like 1 |
| Gene Alias: | 4930500E24Rik|D0Jmb1|Gar22|TU-71.1 |
| Gene Description: | growth arrest-specific 2 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
