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Difference between revisions of "TSS:Mm 100811.1"

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{{TSSDetail
 
{{TSSDetail
 
|Ewsh=
 
|Ewsh=
|all_trans=ENSMUST00000073308.10:0 ENSMUST00000093365.11:0 ENSMUST00000151847.1:0 AK049743:0 AK034755:0 BC068226:0 AK147103:0 AK151625:0 X79233:0 AK146791:0 AK153276:9 AK147909:9 AK150345:11 ENSMUST00000102930.9:12 ENSMUST00000063232.6:-15 NM_001362620:-15 NM_007968:-15 NM_001362617:-15 NM_001362612:-15 NM_001362614:-15 NM_001283062:-15 NM_001283061:-15 NM_001362615:-15 NM_001362613:-15 NM_001362616:-15 NM_001362618:-15 NM_001283063:-15 AK046434:-15 AK019460:17 ENSMUST00000079949.12:-185
+
|all_trans=MGI:99960
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 23: Line 23:
 
|nearest_refseq=NM_007968
 
|nearest_refseq=NM_007968
 
|nearest_unigene=Mm.142822
 
|nearest_unigene=Mm.142822
|num_trans=30
+
|num_trans=14030
 
|species=mouse
 
|species=mouse
 
|start=5099053
 
|start=5099053

Latest revision as of 10:46, 26 July 2021

Basic information about the TSS


TSS ID:mm_100811.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:5099053
End:5099081
Strand:-
TSS Score:1
Start of the center position in the TSS region:5099067
End of the center position in the TSS region:5099068



Gene and protein annotation


Transcript_name:ENSMUST00000073308.10 ENSMUST00000093365.11 ENSMUST00000151847.1 AK049743 AK034755 BC068226 AK147103 AK151625 X79233 AK146791
Distance:0
GeneID:14030
HGNC/MGI_ID:MGI:99960
UniProt_ID:Q3UI30 Q5SUS8 Q5SUT0
Gene_name:Ewing sarcoma breakpoint region 1
Gene_symbol:Ewsr1
Gene_synonyms:Ews
Gene_source:MGI:99960



Transcript annotation


Transcript_name:ENSMUST00000073308.10 ENSMUST00000093365.11 ENSMUST00000151847.1 AK049743 AK034755 BC068226 AK147103 AK151625 X79233 AK146791
Distance:0
Num_trans:14030
All_trans:MGI:99960



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:NM_001362615
Entrez ID:14030
Nearest Unigene:Mm.142822
Nearest Refseq:NM_007968
Nearest Ensembl:ENSMUSG00000009079
Gene Name:Ewing sarcoma breakpoint region 1
Gene Alias:Ews|Ewsh
Gene Description:Ewing sarcoma breakpoint region 1
Gene Type:protein-coding
CpG%:0.135
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):