Difference between revisions of "TSS:Mm 100811.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Ewsh= | |Ewsh= | ||
| − | |all_trans= | + | |all_trans=MGI:99960 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=29 |
|end=5099081 | |end=5099081 | ||
|end_of_center_position=5099068 | |end_of_center_position=5099068 | ||
|entrez_id=14030 | |entrez_id=14030 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=Ews | + | |gene_alias=Ews{{!}}Ewsh |
|gene_description=Ewing sarcoma breakpoint region 1 | |gene_description=Ewing sarcoma breakpoint region 1 | ||
|gene_id=14030 | |gene_id=14030 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:99960 | |hgnc_mgi_id=MGI:99960 | ||
|nearest_ensembl=ENSMUSG00000009079 | |nearest_ensembl=ENSMUSG00000009079 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362615 |
|nearest_refseq=NM_007968 | |nearest_refseq=NM_007968 | ||
|nearest_unigene=Mm.142822 | |nearest_unigene=Mm.142822 | ||
| − | |num_trans= | + | |num_trans=14030 |
|species=mouse | |species=mouse | ||
|start=5099053 | |start=5099053 | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5099067 |
|---|---|
| End of the center position in the TSS region: | 5099068 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000073308.10 ENSMUST00000093365.11 ENSMUST00000151847.1 AK049743 AK034755 BC068226 AK147103 AK151625 X79233 AK146791 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14030 |
| All_trans: | MGI:99960 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_001362615 |
| Entrez ID: | 14030 |
| Nearest Unigene: | Mm.142822 |
| Nearest Refseq: | NM_007968 |
| Nearest Ensembl: | ENSMUSG00000009079 |
| Gene Name: | Ewing sarcoma breakpoint region 1 |
| Gene Alias: | Ews|Ewsh |
| Gene Description: | Ewing sarcoma breakpoint region 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
