Difference between revisions of "TSS:Mm 100818.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CO-5= |
| + | |Emu1= | ||
| + | |all_trans=MGI:2155091 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-15 |
|end=5152272 | |end=5152272 | ||
| + | |end_of_center_position=5152246 | ||
|entrez_id=140703 | |entrez_id=140703 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=AW122071 | + | |gene_alias=AW122071{{!}}CO-5{{!}}Emu1 |
|gene_description=EMI domain containing 1 | |gene_description=EMI domain containing 1 | ||
|gene_id=140703 | |gene_id=140703 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:2155091 | |hgnc_mgi_id=MGI:2155091 | ||
|nearest_ensembl=ENSMUSG00000034164 | |nearest_ensembl=ENSMUSG00000034164 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_152138 |
|nearest_refseq=NM_080595 | |nearest_refseq=NM_080595 | ||
|nearest_unigene=Mm.840 | |nearest_unigene=Mm.840 | ||
| − | |num_trans= | + | |num_trans=140703 |
|species=mouse | |species=mouse | ||
|start=5152218 | |start=5152218 | ||
| + | |start_of_center_position=5152245 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000062821.12 ENSMUST00000163299.7 ENSMUST00000156492 | + | |transcript_name=ENSMUST00000062821.12 ENSMUST00000163299.7 ENSMUST00000156492.1 AJ416093 AK153702 BC130023 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100818.1 | |tss_id=mm_100818.1 | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5152245 |
|---|---|
| End of the center position in the TSS region: | 5152246 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000062821.12 ENSMUST00000163299.7 ENSMUST00000156492.1 AJ416093 AK153702 BC130023 |
|---|---|
| Distance: | 0 |
| Num_trans: | 140703 |
| All_trans: | MGI:2155091 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NR_152138 |
| Entrez ID: | 140703 |
| Nearest Unigene: | Mm.840 |
| Nearest Refseq: | NM_080595 |
| Nearest Ensembl: | ENSMUSG00000034164 |
| Gene Name: | EMI domain containing 1 |
| Gene Alias: | AW122071|CO-5|Emu1 |
| Gene Description: | EMI domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
