Difference between revisions of "TSS:Mm 10082.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000082321.8:0 ENSMUST00000195120.5:0 ENSMUST00000195347.5:0 ENSMUST00000195722.1:0 NM_007758:0 uc007eez.1:0 uc007efa.1:0 uc011wzi.1:0 AK003072:...") |
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |CD21= |
+ | |CD35= | ||
+ | |Cr-1= | ||
+ | |Cr-2= | ||
+ | |Cr1= | ||
+ | |all_trans=MGI:88489 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
− | |distance_to_tss= | + | |distance_to_tss=3 |
|end=195176725 | |end=195176725 | ||
+ | |end_of_center_position=195176717 | ||
|entrez_id=12902 | |entrez_id=12902 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
− | |gene_alias=C3DR | + | |gene_alias=C3DR{{!}}CD21{{!}}CD35{{!}}Cr-1{{!}}Cr-2{{!}}Cr1 |
|gene_description=complement receptor 2 | |gene_description=complement receptor 2 | ||
|gene_id=12902 | |gene_id=12902 | ||
Line 18: | Line 24: | ||
|hgnc_mgi_id=MGI:88489 | |hgnc_mgi_id=MGI:88489 | ||
|nearest_ensembl=ENSMUSG00000026616 | |nearest_ensembl=ENSMUSG00000026616 | ||
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368765 |
|nearest_refseq=NM_007758 | |nearest_refseq=NM_007758 | ||
|nearest_unigene=Mm.235387 | |nearest_unigene=Mm.235387 | ||
− | |num_trans= | + | |num_trans=12902 |
|species=mouse | |species=mouse | ||
|start=195176707 | |start=195176707 | ||
+ | |start_of_center_position=195176716 | ||
|strand=- | |strand=- | ||
− | |tata_box= | + | |tata_box=-35(TGCTATTTAAGG,-,0.00) |
− | |transcript_name=ENSMUST00000082321.8 ENSMUST00000195120.5 ENSMUST00000195347.5 ENSMUST00000195722 | + | |transcript_name=ENSMUST00000082321.8 ENSMUST00000195120.5 ENSMUST00000195347.5 ENSMUST00000195722.1 AK003072 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10082.1 | |tss_id=mm_10082.1 |
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 195176716 |
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End of the center position in the TSS region: | 195176717 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENSMUST00000082321.8 ENSMUST00000195120.5 ENSMUST00000195347.5 ENSMUST00000195722.1 AK003072 |
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Distance: | 0 |
Num_trans: | 12902 |
All_trans: | MGI:88489 |
TATA-Box annotation
Distance to TSS: | 3 |
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Nearest PromoterID: | NM_001368765 |
Entrez ID: | 12902 |
Nearest Unigene: | Mm.235387 |
Nearest Refseq: | NM_007758 |
Nearest Ensembl: | ENSMUSG00000026616 |
Gene Name: | complement receptor 2 |
Gene Alias: | C3DR|CD21|CD35|Cr-1|Cr-2|Cr1 |
Gene Description: | complement receptor 2 |
Gene Type: | protein-coding |
CpG%: | 0.045 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(TGCTATTTAAGG,-,0.00) |