Difference between revisions of "TSS:Mm 100826.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3039616 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001080924 | |nearest_refseq=NM_001080924 | ||
|nearest_unigene=Mm.216313 | |nearest_unigene=Mm.216313 | ||
| − | |num_trans= | + | |num_trans=407821 |
|species=mouse | |species=mouse | ||
|start=5381734 | |start=5381734 | ||
|start_of_center_position=5381739 | |start_of_center_position=5381739 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000172492.7 | + | |transcript_name=ENSMUST00000172492.7 AK133342 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100826.1 | |tss_id=mm_100826.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5SSZ7 | + | |uniprot_id=Q5SSZ7 |
}} | }} | ||
Latest revision as of 10:46, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5381739 |
|---|---|
| End of the center position in the TSS region: | 5381740 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000172492.7 AK133342 |
|---|---|
| Distance: | 0 |
| Num_trans: | 407821 |
| All_trans: | MGI:3039616 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001290501 |
| Entrez ID: | 407821 |
| Nearest Unigene: | Mm.216313 |
| Nearest Refseq: | NM_001080924 |
| Nearest Ensembl: | ENSMUSG00000041961 |
| Gene Name: | zinc and ring finger 3 |
| Gene Alias: | Gm1167 |
| Gene Description: | zinc and ring finger 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
