Difference between revisions of "TSS:Mm 100843.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000093362.11:0 ENSMUST00000140922.1:0 NM_178623:0 uc007hwu.1:0 uc007hwx.1:0 AK033577:0 AK166495:0 AK211020:22 |chr=chr11 |cpg_percent=0.14 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |9130001I21Rik= |
| + | |AW060359= | ||
| + | |Urg4= | ||
| + | |all_trans=MGI:1919296 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
|end=5741182 | |end=5741182 | ||
| + | |end_of_center_position=5741162 | ||
|entrez_id=72046 | |entrez_id=72046 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=2010005J08Rik | + | |gene_alias=2010005J08Rik{{!}}9130001I21Rik{{!}}AW060359{{!}}Urg4{{!}}mKIAA1507 |
|gene_description=upregulator of cell proliferation | |gene_description=upregulator of cell proliferation | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1919296 | |hgnc_mgi_id=MGI:1919296 | ||
| + | |mKIAA1507= | ||
|nearest_ensembl=ENSMUSG00000049680 | |nearest_ensembl=ENSMUSG00000049680 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361591 |
|nearest_refseq=NM_178623 | |nearest_refseq=NM_178623 | ||
|nearest_unigene=Mm.271657 | |nearest_unigene=Mm.271657 | ||
| − | |num_trans= | + | |num_trans=72046 |
|species=mouse | |species=mouse | ||
|start=5741141 | |start=5741141 | ||
| + | |start_of_center_position=5741161 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000093362.11 ENSMUST00000140922 | + | |transcript_name=ENSMUST00000093362.11 ENSMUST00000140922.1 AK033577 AK166495 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100843.1 | |tss_id=mm_100843.1 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5741161 |
|---|---|
| End of the center position in the TSS region: | 5741162 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000093362.11 ENSMUST00000140922.1 AK033577 AK166495 |
|---|---|
| Distance: | 0 |
| Num_trans: | 72046 |
| All_trans: | MGI:1919296 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_001361591 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
