Difference between revisions of "TSS:Mm 100844.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 2: | Line 2: | ||
|2210015D19Rik= | |2210015D19Rik= | ||
|AI596465= | |AI596465= | ||
| − | |all_trans= | + | |all_trans=MGI:1919296 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|entrez_id=76508 | |entrez_id=76508 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=1600028I17Rik | + | |gene_alias=1600028I17Rik{{!}}2210015D19Rik{{!}}AI596465 |
| − | |gene_description= | + | |gene_description=ubiquitin-conjugating enzyme E2D, pseudogene |
|gene_id=72046 | |gene_id=72046 | ||
|gene_name=upregulator of cell proliferation | |gene_name=upregulator of cell proliferation | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_015577 | |nearest_refseq=NR_015577 | ||
|nearest_unigene=Mm.260203 | |nearest_unigene=Mm.260203 | ||
| − | |num_trans= | + | |num_trans=72046 |
|species=mouse | |species=mouse | ||
|start=5762044 | |start=5762044 | ||
| Line 33: | Line 33: | ||
|tss_id=mm_100844.1 | |tss_id=mm_100844.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6ZPP3 |
}} | }} | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5762048 |
|---|---|
| End of the center position in the TSS region: | 5762049 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK129378 |
|---|---|
| Distance: | -36 |
| Num_trans: | 72046 |
| All_trans: | MGI:1919296 |
TATA-Box annotation
| Distance to TSS: | -101 |
|---|---|
| Nearest PromoterID: | NR_015577 |
| Entrez ID: | 76508 |
| Nearest Unigene: | Mm.260203 |
| Nearest Refseq: | NR_015577 |
| Nearest Ensembl: | ENSMUSG00000083844 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 1600028I17Rik|2210015D19Rik|AI596465 |
| Gene Description: | ubiquitin-conjugating enzyme E2D, pseudogene |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
