Difference between revisions of "TSS:Mm 100845.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AW060359= | |AW060359= | ||
|Urg4= | |Urg4= | ||
| − | |all_trans= | + | |all_trans=MGI:1919296 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_178623 | |nearest_refseq=NM_178623 | ||
|nearest_unigene=Mm.271657 | |nearest_unigene=Mm.271657 | ||
| − | |num_trans= | + | |num_trans=72046 |
|species=mouse | |species=mouse | ||
|start=5762358 | |start=5762358 | ||
|start_of_center_position=5762381 | |start_of_center_position=5762381 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 | + | |transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 AK035580 AK041953 AK037923 AK053862 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100845.1 | |tss_id=mm_100845.1 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5762381 |
|---|---|
| End of the center position in the TSS region: | 5762382 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 AK035580 AK041953 AK037923 AK053862 |
|---|---|
| Distance: | 0 |
| Num_trans: | 72046 |
| All_trans: | MGI:1919296 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001361588 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
