Difference between revisions of "TSS:Mm 100848.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC010750:-354 AK146703:-375 AK169019:-375 ENSMUST00000020768.3:-386 AF029843:-386 NM_018870:-449 uc007hxe.2:-449 |chr=chr11 |cpg_percent=0.03 |distance=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1933118 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=463 | |distance_to_tss=463 | ||
|end=5803347 | |end=5803347 | ||
| + | |end_of_center_position=5803334 | ||
|entrez_id=56012 | |entrez_id=56012 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_018870 | |nearest_refseq=NM_018870 | ||
|nearest_unigene=Mm.219627 | |nearest_unigene=Mm.219627 | ||
| − | |num_trans= | + | |num_trans=56012 |
|species=mouse | |species=mouse | ||
|start=5803319 | |start=5803319 | ||
| + | |start_of_center_position=5803333 | ||
|strand=- | |strand=- | ||
|transcript_name=BC010750 | |transcript_name=BC010750 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=mm_100848.1 | |tss_id=mm_100848.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5803333 |
|---|---|
| End of the center position in the TSS region: | 5803334 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC010750 |
|---|---|
| Distance: | -354 |
| Num_trans: | 56012 |
| All_trans: | MGI:1933118 |
TATA-Box annotation
| Distance to TSS: | 463 |
|---|---|
| Nearest PromoterID: | NM_018870 |
| Entrez ID: | 56012 |
| Nearest Unigene: | Mm.219627 |
| Nearest Refseq: | NM_018870 |
| Nearest Ensembl: | ENSMUSG00000020475 |
| Gene Name: | phosphoglycerate mutase 2 |
| Gene Alias: | - |
| Gene Description: | phosphoglycerate mutase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
