Difference between revisions of "TSS:Mm 10085.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|AA409679= | |AA409679= | ||
| − | |all_trans= | + | |all_trans=MGI:2442917 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 10: | ||
|entrez_id=269233 | |entrez_id=269233 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=9630050M13Rik | + | |gene_alias=9630050M13Rik{{!}}AA409679 |
| − | |gene_description= | + | |gene_description=family with sequence similarity 171, member A1 |
|gene_id=269233 | |gene_id=269233 | ||
| − | |gene_name= | + | |gene_name=family with sequence similarity 171, member A1 |
|gene_source=MGI:2442917 | |gene_source=MGI:2442917 | ||
|gene_symbol=Fam171a1 | |gene_symbol=Fam171a1 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001081161 | |nearest_refseq=NM_001081161 | ||
|nearest_unigene=Mm.23044 | |nearest_unigene=Mm.23044 | ||
| − | |num_trans= | + | |num_trans=269233 |
|species=mouse | |species=mouse | ||
|start=3114220 | |start=3114220 | ||
|start_of_center_position=3114222 | |start_of_center_position=3114222 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000072955.11 | + | |transcript_name=ENSMUST00000072955.11 AK036270 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10085.1 | |tss_id=mm_10085.1 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3114222 |
|---|---|
| End of the center position in the TSS region: | 3114223 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000072955.11 AK036270 |
|---|---|
| Distance: | 0 |
| Num_trans: | 269233 |
| All_trans: | MGI:2442917 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001310434 |
| Entrez ID: | 269233 |
| Nearest Unigene: | Mm.23044 |
| Nearest Refseq: | NM_001081161 |
| Nearest Ensembl: | ENSMUSG00000050530 |
| Gene Name: | family with sequence similarity 171, member A1 |
| Gene Alias: | 9630050M13Rik|AA409679 |
| Gene Description: | family with sequence similarity 171, member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
