Difference between revisions of "TSS:Mm 100859.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK218431:112 ENSMUST00000136714.1:117 |chr=chr11 |cpg_percent=0.04 |distance=112 |distance_to_tss=1361 |end=5876909 |entrez_id=18972 |gc_percent=0.61691...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1097163 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=112 | |distance=112 | ||
| − | |distance_to_tss= | + | |distance_to_tss=768 |
|end=5876909 | |end=5876909 | ||
| + | |end_of_center_position=5876895 | ||
|entrez_id=18972 | |entrez_id=18972 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=50kDa | + | |gene_alias=50kDa{{!}}p50{{!}}po1D2 |
| − | |gene_description= | + | |gene_description=polymerase (DNA directed), delta 2, regulatory subunit |
|gene_id=18972 | |gene_id=18972 | ||
| − | |gene_name= | + | |gene_name=polymerase (DNA directed), delta 2, regulatory subunit |
|gene_source=MGI:1097163 | |gene_source=MGI:1097163 | ||
|gene_symbol=Pold2 | |gene_symbol=Pold2 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:1097163 | |hgnc_mgi_id=MGI:1097163 | ||
|nearest_ensembl=ENSMUSG00000020471 | |nearest_ensembl=ENSMUSG00000020471 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361942 |
|nearest_refseq=NM_008894 | |nearest_refseq=NM_008894 | ||
|nearest_unigene=Mm.35788 | |nearest_unigene=Mm.35788 | ||
| − | |num_trans= | + | |num_trans=18972 |
| + | |p50= | ||
| + | |po1D2= | ||
|species=mouse | |species=mouse | ||
|start=5876880 | |start=5876880 | ||
| + | |start_of_center_position=5876894 | ||
|strand=- | |strand=- | ||
|transcript_name=AK218431 | |transcript_name=AK218431 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 5876894 |
|---|---|
| End of the center position in the TSS region: | 5876895 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK218431 |
|---|---|
| Distance: | 112 |
| Num_trans: | 18972 |
| All_trans: | MGI:1097163 |
TATA-Box annotation
| Distance to TSS: | 768 |
|---|---|
| Nearest PromoterID: | NM_001361942 |
| Entrez ID: | 18972 |
| Nearest Unigene: | Mm.35788 |
| Nearest Refseq: | NM_008894 |
| Nearest Ensembl: | ENSMUSG00000020471 |
| Gene Name: | polymerase (DNA directed), delta 2, regulatory subunit |
| Gene Alias: | 50kDa|p50|po1D2 |
| Gene Description: | polymerase (DNA directed), delta 2, regulatory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
