Difference between revisions of "TSS:Mm 10086.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|AA409679= | |AA409679= | ||
| − | |all_trans= | + | |all_trans=MGI:2442917 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001081161 | |nearest_refseq=NM_001081161 | ||
|nearest_unigene=Mm.23044 | |nearest_unigene=Mm.23044 | ||
| − | |num_trans= | + | |num_trans=269233 |
|species=mouse | |species=mouse | ||
|start=3118335 | |start=3118335 | ||
|start_of_center_position=3118363 | |start_of_center_position=3118363 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000115099.8 | + | |transcript_name=ENSMUST00000115099.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10086.1 | |tss_id=mm_10086.1 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3118363 |
|---|---|
| End of the center position in the TSS region: | 3118364 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000115099.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 269233 |
| All_trans: | MGI:2442917 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001081161 |
| Entrez ID: | 269233 |
| Nearest Unigene: | Mm.23044 |
| Nearest Refseq: | NM_001081161 |
| Nearest Ensembl: | ENSMUSG00000050530 |
| Gene Name: | family with sequence similarity 171, member A1 |
| Gene Alias: | 9630050M13Rik|AA409679 |
| Gene Description: | family with sequence similarity 171, member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
