Difference between revisions of "TSS:Mm 100861.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_008894:0 uc007hxk.2:0 AK013901:29 ENSMUST00000102922.9:-32 Z72486:35 ENSMUST00000134957.1:40 BC003342:40 AK158957:50 |chr=chr11 |cpg_percent=0.13 |di...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_008894 | + | |all_trans=NM_008894:0 AK013901:29 ENSMUST00000102922.9:-32 Z72486:35 ENSMUST00000134957.1:40 BC003342:40 AK158957:50 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=5878260 | |end=5878260 | ||
| + | |end_of_center_position=5878256 | ||
|entrez_id=18972 | |entrez_id=18972 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=50kDa | + | |gene_alias=50kDa{{!}}p50{{!}}po1D2 |
| − | |gene_description= | + | |gene_description=polymerase (DNA directed), delta 2, regulatory subunit |
|gene_id=18972 | |gene_id=18972 | ||
| − | |gene_name= | + | |gene_name=polymerase (DNA directed), delta 2, regulatory subunit |
|gene_source=MGI:1097163 | |gene_source=MGI:1097163 | ||
|gene_symbol=Pold2 | |gene_symbol=Pold2 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_008894 | |nearest_refseq=NM_008894 | ||
|nearest_unigene=Mm.35788 | |nearest_unigene=Mm.35788 | ||
| − | |num_trans= | + | |num_trans=7 |
| + | |p50= | ||
| + | |po1D2= | ||
|species=mouse | |species=mouse | ||
|start=5878251 | |start=5878251 | ||
| + | |start_of_center_position=5878255 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_008894 | + | |transcript_name=NM_008894.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100861.1 | |tss_id=mm_100861.1 | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5878255 |
|---|---|
| End of the center position in the TSS region: | 5878256 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_008894.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | NM_008894:0 AK013901:29 ENSMUST00000102922.9:-32 Z72486:35 ENSMUST00000134957.1:40 BC003342:40 AK158957:50 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_008894 |
| Entrez ID: | 18972 |
| Nearest Unigene: | Mm.35788 |
| Nearest Refseq: | NM_008894 |
| Nearest Ensembl: | ENSMUSG00000020471 |
| Gene Name: | polymerase (DNA directed), delta 2, regulatory subunit |
| Gene Alias: | 50kDa|p50|po1D2 |
| Gene Description: | polymerase (DNA directed), delta 2, regulatory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
