Personal tools

Difference between revisions of "TSS:Mm 100867.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 4: Line 4:
 
|Mylc2a=
 
|Mylc2a=
 
|RLC-A=
 
|RLC-A=
|all_trans=S70785:55 BC061100:-204 ENSMUST00000102921.3:-208 NM_022879:-208 uc007hxl.1:-208 AK146716:-208
+
|all_trans=MGI:107495
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 13: Line 13:
 
|entrez_id=17898
 
|entrez_id=17898
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=MLC-2alpha
+
|gene_alias=MLC-2alpha{{!}}MLC2a{{!}}MYL2A{{!}}Mylc2a{{!}}RLC-A
|gene_description="myosin, light polypeptide 7, regulatory"
+
|gene_description=myosin, light polypeptide 7, regulatory
 
|gene_id=17898
 
|gene_id=17898
|gene_name="myosin, light polypeptide 7, regulatory"
+
|gene_name=myosin, light polypeptide 7, regulatory
 
|gene_source=MGI:107495
 
|gene_source=MGI:107495
 
|gene_symbol=Myl7
 
|gene_symbol=Myl7
Line 26: Line 26:
 
|nearest_refseq=NM_022879
 
|nearest_refseq=NM_022879
 
|nearest_unigene=Mm.46514
 
|nearest_unigene=Mm.46514
|num_trans=6
+
|num_trans=17898
 
|species=mouse
 
|species=mouse
 
|start=5898560
 
|start=5898560

Latest revision as of 10:47, 26 July 2021

Basic information about the TSS


TSS ID:mm_100867.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:5898560
End:5898574
Strand:-
TSS Score:1
Start of the center position in the TSS region:5898567
End of the center position in the TSS region:5898568



Gene and protein annotation


Transcript_name:S70785
Distance:55
GeneID:17898
HGNC/MGI_ID:MGI:107495
UniProt_ID:
Gene_name:myosin, light polypeptide 7, regulatory
Gene_symbol:Myl7
Gene_synonyms:MLC-2alpha MLC2a Mylc2a RLC-A
Gene_source:MGI:107495



Transcript annotation


Transcript_name:S70785
Distance:55
Num_trans:17898
All_trans:MGI:107495



TATA-Box annotation


Distance to TSS:215
Nearest PromoterID:NM_022879
Entrez ID:17898
Nearest Unigene:Mm.46514
Nearest Refseq:NM_022879
Nearest Ensembl:ENSMUSG00000020469
Gene Name:myosin, light polypeptide 7, regulatory
Gene Alias:MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A
Gene Description:myosin, light polypeptide 7, regulatory
Gene Type:protein-coding
CpG%:0.02
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):