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Difference between revisions of "TSS:Mm 100868.1"

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Line 4: Line 4:
 
|Mylc2a=
 
|Mylc2a=
 
|RLC-A=
 
|RLC-A=
|all_trans=S70785:112 BC061100:-146 ENSMUST00000102921.3:-150 NM_022879:-150 uc007hxl.1:-150 AK146716:-150
+
|all_trans=MGI:107495
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 13: Line 13:
 
|entrez_id=17898
 
|entrez_id=17898
 
|gc_percent=0.587065
 
|gc_percent=0.587065
|gene_alias=MLC-2alpha
+
|gene_alias=MLC-2alpha{{!}}MLC2a{{!}}MYL2A{{!}}Mylc2a{{!}}RLC-A
|gene_description="myosin, light polypeptide 7, regulatory"
+
|gene_description=myosin, light polypeptide 7, regulatory
 
|gene_id=17898
 
|gene_id=17898
|gene_name="myosin, light polypeptide 7, regulatory"
+
|gene_name=myosin, light polypeptide 7, regulatory
 
|gene_source=MGI:107495
 
|gene_source=MGI:107495
 
|gene_symbol=Myl7
 
|gene_symbol=Myl7
Line 26: Line 26:
 
|nearest_refseq=NM_022879
 
|nearest_refseq=NM_022879
 
|nearest_unigene=Mm.46514
 
|nearest_unigene=Mm.46514
|num_trans=6
+
|num_trans=17898
 
|species=mouse
 
|species=mouse
 
|start=5898617
 
|start=5898617

Latest revision as of 10:47, 26 July 2021

Basic information about the TSS


TSS ID:mm_100868.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:5898617
End:5898632
Strand:-
TSS Score:1
Start of the center position in the TSS region:5898624
End of the center position in the TSS region:5898625



Gene and protein annotation


Transcript_name:S70785
Distance:112
GeneID:17898
HGNC/MGI_ID:MGI:107495
UniProt_ID:
Gene_name:myosin, light polypeptide 7, regulatory
Gene_symbol:Myl7
Gene_synonyms:MLC-2alpha MLC2a Mylc2a RLC-A
Gene_source:MGI:107495



Transcript annotation


Transcript_name:S70785
Distance:112
Num_trans:17898
All_trans:MGI:107495



TATA-Box annotation


Distance to TSS:157
Nearest PromoterID:NM_022879
Entrez ID:17898
Nearest Unigene:Mm.46514
Nearest Refseq:NM_022879
Nearest Ensembl:ENSMUSG00000020469
Gene Name:myosin, light polypeptide 7, regulatory
Gene Alias:MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A
Gene Description:myosin, light polypeptide 7, regulatory
Gene Type:protein-coding
CpG%:0.01
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):