Difference between revisions of "TSS:Mm 100869.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000102921.3:0 NM_022879:0 uc007hxl.1:0 BC061100:0 AK146716:0 S70785:266 |chr=chr11 |cpg_percent=0.01 |distance=0 |distance_to_tss=2 |end=589878...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MLC2a= |
| + | |MYL2A= | ||
| + | |Mylc2a= | ||
| + | |RLC-A= | ||
| + | |all_trans=MGI:107495 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=5898788 | |end=5898788 | ||
| + | |end_of_center_position=5898780 | ||
|entrez_id=17898 | |entrez_id=17898 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=MLC-2alpha | + | |gene_alias=MLC-2alpha{{!}}MLC2a{{!}}MYL2A{{!}}Mylc2a{{!}}RLC-A |
| − | |gene_description= | + | |gene_description=myosin, light polypeptide 7, regulatory |
|gene_id=17898 | |gene_id=17898 | ||
| − | |gene_name= | + | |gene_name=myosin, light polypeptide 7, regulatory |
|gene_source=MGI:107495 | |gene_source=MGI:107495 | ||
|gene_symbol=Myl7 | |gene_symbol=Myl7 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_022879 | |nearest_refseq=NM_022879 | ||
|nearest_unigene=Mm.46514 | |nearest_unigene=Mm.46514 | ||
| − | |num_trans= | + | |num_trans=17898 |
|species=mouse | |species=mouse | ||
|start=5898771 | |start=5898771 | ||
| + | |start_of_center_position=5898779 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000102921.3 | + | |transcript_name=ENSMUST00000102921.3 BC061100 AK146716 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100869.1 | |tss_id=mm_100869.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5SVI8 Q9QVP4 | |uniprot_id=Q5SVI8 Q9QVP4 | ||
}} | }} | ||
Latest revision as of 10:47, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5898779 |
|---|---|
| End of the center position in the TSS region: | 5898780 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102921.3 BC061100 AK146716 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17898 |
| All_trans: | MGI:107495 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_022879 |
| Entrez ID: | 17898 |
| Nearest Unigene: | Mm.46514 |
| Nearest Refseq: | NM_022879 |
| Nearest Ensembl: | ENSMUSG00000020469 |
| Gene Name: | myosin, light polypeptide 7, regulatory |
| Gene Alias: | MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A |
| Gene Description: | myosin, light polypeptide 7, regulatory |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
