Difference between revisions of "TSS:Mm 100874.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 7: | Line 7: | ||
|Hlb62= | |Hlb62= | ||
|MODY2= | |MODY2= | ||
| − | |all_trans= | + | |all_trans=MGI:1270854 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 16: | Line 16: | ||
|entrez_id=103988 | |entrez_id=103988 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=GLK | + | |gene_alias=GLK{{!}}Gk{{!}}Gls006{{!}}HK4{{!}}HKIV{{!}}HXKP{{!}}Hlb62{{!}}MODY2 |
|gene_description=glucokinase | |gene_description=glucokinase | ||
|gene_id=103988 | |gene_id=103988 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_010292 | |nearest_refseq=NM_010292 | ||
|nearest_unigene=Mm.220358 | |nearest_unigene=Mm.220358 | ||
| − | |num_trans= | + | |num_trans=103988 |
|species=mouse | |species=mouse | ||
|start=5950018 | |start=5950018 | ||
|start_of_center_position=5950040 | |start_of_center_position=5950040 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000102920.3 | + | |transcript_name=ENSMUST00000102920.3 M58755 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100874.1 | |tss_id=mm_100874.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5SVI5 |
}} | }} | ||
Latest revision as of 10:48, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5950040 |
|---|---|
| End of the center position in the TSS region: | 5950041 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000102920.3 M58755 |
|---|---|
| Distance: | -18 |
| Num_trans: | 103988 |
| All_trans: | MGI:1270854 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_010292 |
| Entrez ID: | 103988 |
| Nearest Unigene: | Mm.220358 |
| Nearest Refseq: | NM_010292 |
| Nearest Ensembl: | ENSMUSG00000041798 |
| Gene Name: | glucokinase |
| Gene Alias: | GLK|Gk|Gls006|HK4|HKIV|HXKP|Hlb62|MODY2 |
| Gene Description: | glucokinase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
