Difference between revisions of "TSS:Mm 100888.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:88257 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=161 | |distance_to_tss=161 | ||
|end=6065635 | |end=6065635 | ||
| + | |end_of_center_position=6065588 | ||
|entrez_id=12323 | |entrez_id=12323 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=CaMKII | |gene_alias=CaMKII | ||
| − | |gene_description= | + | |gene_description=calcium/calmodulin-dependent protein kinase II, beta |
|gene_id=12323 | |gene_id=12323 | ||
| − | |gene_name= | + | |gene_name=calcium/calmodulin-dependent protein kinase II, beta |
|gene_source=MGI:88257 | |gene_source=MGI:88257 | ||
|gene_symbol=Camk2b | |gene_symbol=Camk2b | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:88257 | |hgnc_mgi_id=MGI:88257 | ||
|nearest_ensembl=ENSMUSG00000057897 | |nearest_ensembl=ENSMUSG00000057897 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007595 |
|nearest_refseq=NM_007595 | |nearest_refseq=NM_007595 | ||
|nearest_unigene=Mm.439733 | |nearest_unigene=Mm.439733 | ||
| − | |num_trans= | + | |num_trans=12323 |
|species=mouse | |species=mouse | ||
|start=6065539 | |start=6065539 | ||
| + | |start_of_center_position=6065587 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803 | |transcript_name=ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803 | ||
Latest revision as of 10:48, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6065587 |
|---|---|
| End of the center position in the TSS region: | 6065588 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000109815.8 ENSMUST00000109812.8 ENSMUST00000093355.11 ENSMUST00000066431.13 ENSMUST00000019133.10 ENSMUST00000101586.2 X63615 BC080273 AK163698 BC024803 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12323 |
| All_trans: | MGI:88257 |
TATA-Box annotation
| Distance to TSS: | 161 |
|---|---|
| Nearest PromoterID: | NM_007595 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Alias: | CaMKII |
| Gene Description: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
