Difference between revisions of "TSS:Mm 100901.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000117476.1:29 NR_029471:-265 uc011xrh.1:-265 |chr=chr11 |cpg_percent=0.025 |distance=29 |distance_to_tss=266 |end=6173066 |entrez_id=100042173...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |OTTMUSG00000005107= |
| + | |all_trans=MGI:3650298 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=266 | |distance_to_tss=266 | ||
|end=6173066 | |end=6173066 | ||
| + | |end_of_center_position=6173066 | ||
|entrez_id=100042173 | |entrez_id=100042173 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=Gm11968 | + | |gene_alias=Gm11968 |
| − | |gene_description= | + | |gene_description=ribosomal protein S15A, pseudogene 6 |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=ribosomal protein S15A, pseudogene 6 |
|gene_source=MGI:3650298 | |gene_source=MGI:3650298 | ||
|gene_symbol=Rps15a-ps6 | |gene_symbol=Rps15a-ps6 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NR_029471 | |nearest_refseq=NR_029471 | ||
|nearest_unigene=Mm.441799 | |nearest_unigene=Mm.441799 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=6173064 | |start=6173064 | ||
| + | |start_of_center_position=6173065 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000117476.1 | |transcript_name=ENSMUST00000117476.1 | ||
Latest revision as of 10:48, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6173065 |
|---|---|
| End of the center position in the TSS region: | 6173066 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000117476.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | |
| All_trans: | MGI:3650298 |
TATA-Box annotation
| Distance to TSS: | 266 |
|---|---|
| Nearest PromoterID: | NR_029471 |
| Entrez ID: | 100042173 |
| Nearest Unigene: | Mm.441799 |
| Nearest Refseq: | NR_029471 |
| Nearest Ensembl: | |
| Gene Name: | ribosomal protein S15A, pseudogene 6 |
| Gene Alias: | Gm11968 |
| Gene Description: | ribosomal protein S15A, pseudogene 6 |
| Gene Type: | pseudo |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
