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Difference between revisions of "TSS:Mm 100903.1"

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{{TSSDetail
 
{{TSSDetail
 
|BC024322=
 
|BC024322=
|all_trans=AK049739:0 BC024322:0 AK036694:0 AK171224:0 AK159391:0 AK159458:0 AK169797:0 AK030050:0 AK170329:0 AK046219:0 EU350933:4 AK050476:6 BC037090:7 AK215033:68 BC052089:134 ENSMUST00000066496.9:-205 NM_173748:-241 NM_001363446:-241
+
|all_trans=MGI:2144158
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 24: Line 24:
 
|nearest_refseq=NM_173748
 
|nearest_refseq=NM_173748
 
|nearest_unigene=Mm.25321
 
|nearest_unigene=Mm.25321
|num_trans=18
+
|num_trans=209586
 
|species=mouse
 
|species=mouse
 
|start=6200145
 
|start=6200145

Latest revision as of 10:48, 26 July 2021

Basic information about the TSS


TSS ID:mm_100903.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6200145
End:6200210
Strand:-
TSS Score:1
Start of the center position in the TSS region:6200177
End of the center position in the TSS region:6200178



Gene and protein annotation


Transcript_name:AK049739 BC024322 AK036694 AK171224 AK159391 AK159458 AK169797 AK030050 AK170329 AK046219
Distance:0
GeneID:209586
HGNC/MGI_ID:MGI:2144158
UniProt_ID:
Gene_name:NudC domain containing 3
Gene_symbol:Nudcd3
Gene_synonyms:
Gene_source:MGI:2144158



Transcript annotation


Transcript_name:AK049739 BC024322 AK036694 AK171224 AK159391 AK159458 AK169797 AK030050 AK170329 AK046219
Distance:0
Num_trans:209586
All_trans:MGI:2144158



TATA-Box annotation


Distance to TSS:273
Nearest PromoterID:NM_173748
Entrez ID:209586
Nearest Unigene:Mm.25321
Nearest Refseq:NM_173748
Nearest Ensembl:ENSMUSG00000053838
Gene Name:NudC domain containing 3
Gene Alias:AI427847|BC024322|mKIAA1068
Gene Description:NudC domain containing 3
Gene Type:protein-coding
CpG%:0.1
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):