Difference between revisions of "TSS:Mm 100916.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_134020:-8 uc007hye.1:-8 BC023041:-8 AK182125:8 AK078425:-18 AF368921:-30 ENSMUST00000132147.2:-36 AK158876:-40 ENSMUST00000004508.12:-41 ENSMUST00000...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI326346= |
| + | |all_trans=MGI:1915070 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=6274829 | |end=6274829 | ||
| + | |end_of_center_position=6274824 | ||
|entrez_id=103694 | |entrez_id=103694 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=1110014L17Rik | + | |gene_alias=1110014L17Rik{{!}}AI326346 |
|gene_description=transmembrane p24 trafficking protein 4 | |gene_description=transmembrane p24 trafficking protein 4 | ||
|gene_id=103694 | |gene_id=103694 | ||
| − | |gene_name=transmembrane | + | |gene_name=transmembrane p24 trafficking protein 4 |
|gene_source=MGI:1915070 | |gene_source=MGI:1915070 | ||
|gene_symbol=Tmed4 | |gene_symbol=Tmed4 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_134020 | |nearest_refseq=NM_134020 | ||
|nearest_unigene=Mm.254495 | |nearest_unigene=Mm.254495 | ||
| − | |num_trans= | + | |num_trans=103694 |
|species=mouse | |species=mouse | ||
|start=6274818 | |start=6274818 | ||
| + | |start_of_center_position=6274823 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC023041 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100916.1 | |tss_id=mm_100916.1 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6274823 |
|---|---|
| End of the center position in the TSS region: | 6274824 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC023041 |
|---|---|
| Distance: | -8 |
| Num_trans: | 103694 |
| All_trans: | MGI:1915070 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_134020 |
| Entrez ID: | 103694 |
| Nearest Unigene: | Mm.254495 |
| Nearest Refseq: | NM_134020 |
| Nearest Ensembl: | ENSMUSG00000004394 |
| Gene Name: | transmembrane p24 trafficking protein 4 |
| Gene Alias: | 1110014L17Rik|AI326346 |
| Gene Description: | transmembrane p24 trafficking protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
