Difference between revisions of "TSS:Mm 100918.1"
From referenceTSS
| Line 2: | Line 2: | ||
|2210412K19Rik= | |2210412K19Rik= | ||
|AA409584= | |AA409584= | ||
| − | |all_trans= | + | |all_trans=MGI:5825907 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|d1401= | |d1401= | ||
| − | |distance= | + | |distance=287 |
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
|end=6292149 | |end=6292149 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_010956 | |nearest_refseq=NM_010956 | ||
|nearest_unigene=Mm.276348 | |nearest_unigene=Mm.276348 | ||
| − | |num_trans= | + | |num_trans=108167883 |
|species=mouse | |species=mouse | ||
|start=6292131 | |start=6292131 | ||
|start_of_center_position=6292140 | |start_of_center_position=6292140 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK085849 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100918.1 | |tss_id=mm_100918.1 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6292140 |
|---|---|
| End of the center position in the TSS region: | 6292141 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK085849 |
|---|---|
| Distance: | 287 |
| Num_trans: | 108167883 |
| All_trans: | MGI:5825907 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_001361904 |
| Entrez ID: | 18293 |
| Nearest Unigene: | Mm.276348 |
| Nearest Refseq: | NM_010956 |
| Nearest Ensembl: | ENSMUSG00000020456 |
| Gene Name: | predicted gene, 46270 |
| Gene Alias: | 2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192 |
| Gene Description: | oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
