Difference between revisions of "TSS:Mm 100923.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |H2a.z-2= |
| + | |H2av= | ||
| + | |all_trans=MGI:1924855 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=6444439 | |end=6444439 | ||
| + | |end_of_center_position=6444412 | ||
|entrez_id=77605 | |entrez_id=77605 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=C530002L11Rik | + | |gene_alias=C530002L11Rik{{!}}H2A.Z2{{!}}H2a.z-2{{!}}H2av{{!}}Tg(Wnt1-cre)11Rth{{!}}Wnt1-Cre{{!}}Wnt1::Cre{{!}}Wnt1cre |
| − | |gene_description= | + | |gene_description=H2A histone family, member V |
|gene_id=77605 | |gene_id=77605 | ||
| − | |gene_name= | + | |gene_name=H2A.Z histone variant 2 |
|gene_source=MGI:1924855 | |gene_source=MGI:1924855 | ||
| − | |gene_symbol= | + | |gene_symbol=H2az2 |
| − | |gene_synonyms=C530002L11Rik | + | |gene_synonyms=C530002L11Rik H2A.Z2 H2afv |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1924855 | |hgnc_mgi_id=MGI:1924855 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_029938 | |nearest_refseq=NM_029938 | ||
|nearest_unigene=Mm.27624 | |nearest_unigene=Mm.27624 | ||
| − | |num_trans= | + | |num_trans=77605 |
|species=mouse | |species=mouse | ||
|start=6444384 | |start=6444384 | ||
| + | |start_of_center_position=6444411 | ||
|strand=- | |strand=- | ||
|transcript_name=AK168110 BC147293 BC147294 BC147741 BC147751 | |transcript_name=AK168110 BC147293 BC147294 BC147741 BC147751 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6444411 |
|---|---|
| End of the center position in the TSS region: | 6444412 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK168110 BC147293 BC147294 BC147741 BC147751 |
|---|---|
| Distance: | 0 |
| Num_trans: | 77605 |
| All_trans: | MGI:1924855 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_029938 |
| Entrez ID: | 77605 |
| Nearest Unigene: | Mm.27624 |
| Nearest Refseq: | NM_029938 |
| Nearest Ensembl: | ENSMUSG00000041126 |
| Gene Name: | H2A.Z histone variant 2 |
| Gene Alias: | C530002L11Rik|H2A.Z2|H2a.z-2|H2av|Tg(Wnt1-cre)11Rth|Wnt1-Cre|Wnt1::Cre|Wnt1cre |
| Gene Description: | H2A histone family, member V |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
