Difference between revisions of "TSS:Mm 100926.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|Cager-2= | |Cager-2= | ||
|D11Bwg0414e= | |D11Bwg0414e= | ||
| − | |all_trans= | + | |all_trans=MGI:5451900 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 12: | Line 12: | ||
|entrez_id=19291 | |entrez_id=19291 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=2310015K15Rik | + | |gene_alias=2310015K15Rik{{!}}AA114818{{!}}Cager-2{{!}}D11Bwg0414e |
|gene_description=purine rich element binding protein B | |gene_description=purine rich element binding protein B | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=predicted gene, 22123 |
|gene_source=MGI:5451900 | |gene_source=MGI:5451900 | ||
|gene_symbol=Gm22123 | |gene_symbol=Gm22123 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_011221 | |nearest_refseq=NM_011221 | ||
|nearest_unigene=Mm.296150 | |nearest_unigene=Mm.296150 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=6472232 | |start=6472232 | ||
|start_of_center_position=6472235 | |start_of_center_position=6472235 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=6(CCATATATGGCA,+,0.00) |
|transcript_name=ENSMUST00000175144.1 | |transcript_name=ENSMUST00000175144.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6472235 |
|---|---|
| End of the center position in the TSS region: | 6472236 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000175144.1 |
|---|---|
| Distance: | -38 |
| Num_trans: | |
| All_trans: | MGI:5451900 |
TATA-Box annotation
| Distance to TSS: | 3840 |
|---|---|
| Nearest PromoterID: | NM_011221 |
| Entrez ID: | 19291 |
| Nearest Unigene: | Mm.296150 |
| Nearest Refseq: | NM_011221 |
| Nearest Ensembl: | ENSMUSG00000094483 |
| Gene Name: | predicted gene, 22123 |
| Gene Alias: | 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e |
| Gene Description: | purine rich element binding protein B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 6(CCATATATGGCA,+,0.00) |
