Difference between revisions of "TSS:Mm 100927.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK139376:236 AK049443:238 BC156317:-416 ENSMUST00000179343.2:-447 AF017630:-447 |chr=chr11 |cpg_percent=0.155 |distance=236 |distance_to_tss=616 |end=64...") |
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |AA114818= |
| + | |Cager-2= | ||
| + | |D11Bwg0414e= | ||
| + | |all_trans=MGI:1338779 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=616 | |distance_to_tss=616 | ||
|end=6475470 | |end=6475470 | ||
| + | |end_of_center_position=6475461 | ||
|entrez_id=19291 | |entrez_id=19291 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=2310015K15Rik | + | |gene_alias=2310015K15Rik{{!}}AA114818{{!}}Cager-2{{!}}D11Bwg0414e |
|gene_description=purine rich element binding protein B | |gene_description=purine rich element binding protein B | ||
|gene_id=19291 | |gene_id=19291 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_011221 | |nearest_refseq=NM_011221 | ||
|nearest_unigene=Mm.296150 | |nearest_unigene=Mm.296150 | ||
| − | |num_trans= | + | |num_trans=19291 |
|species=mouse | |species=mouse | ||
|start=6475450 | |start=6475450 | ||
| + | |start_of_center_position=6475460 | ||
|strand=- | |strand=- | ||
|transcript_name=AK139376 | |transcript_name=AK139376 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6475460 |
|---|---|
| End of the center position in the TSS region: | 6475461 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK139376 |
|---|---|
| Distance: | 236 |
| Num_trans: | 19291 |
| All_trans: | MGI:1338779 |
TATA-Box annotation
| Distance to TSS: | 616 |
|---|---|
| Nearest PromoterID: | NM_011221 |
| Entrez ID: | 19291 |
| Nearest Unigene: | Mm.296150 |
| Nearest Refseq: | NM_011221 |
| Nearest Ensembl: | ENSMUSG00000094483 |
| Gene Name: | purine rich element binding protein B |
| Gene Alias: | 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e |
| Gene Description: | purine rich element binding protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
