Difference between revisions of "TSS:Mm 100929.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_011221:0 uc007hyr.3:0 ENSMUST00000179343.2:76 AF017630:76 BC156317:107 |chr=chr11 |cpg_percent=0.2 |distance=0 |distance_to_tss=29 |end=6476102 |entr...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_011221 | + | |AA114818= |
| + | |Cager-2= | ||
| + | |D11Bwg0414e= | ||
| + | |all_trans=NM_011221:0 ENSMUST00000179343.2:76 AF017630:76 BC156317:107 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
|end=6476102 | |end=6476102 | ||
| + | |end_of_center_position=6476048 | ||
|entrez_id=19291 | |entrez_id=19291 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=2310015K15Rik | + | |gene_alias=2310015K15Rik{{!}}AA114818{{!}}Cager-2{{!}}D11Bwg0414e |
|gene_description=purine rich element binding protein B | |gene_description=purine rich element binding protein B | ||
|gene_id=19291 | |gene_id=19291 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_011221 | |nearest_refseq=NM_011221 | ||
|nearest_unigene=Mm.296150 | |nearest_unigene=Mm.296150 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=6475992 | |start=6475992 | ||
| + | |start_of_center_position=6476047 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_011221 | + | |transcript_name=NM_011221.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100929.1 | |tss_id=mm_100929.1 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6476047 |
|---|---|
| End of the center position in the TSS region: | 6476048 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_011221.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_011221:0 ENSMUST00000179343.2:76 AF017630:76 BC156317:107 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_011221 |
| Entrez ID: | 19291 |
| Nearest Unigene: | Mm.296150 |
| Nearest Refseq: | NM_011221 |
| Nearest Ensembl: | ENSMUSG00000094483 |
| Gene Name: | purine rich element binding protein B |
| Gene Alias: | 2310015K15Rik|AA114818|Cager-2|D11Bwg0414e |
| Gene Description: | purine rich element binding protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
