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Difference between revisions of "TSS:Mm 100934.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000144725.7:-46 BC113755:-51 BC113954:-51 AK042033:-55 AK146251:-78 AK171505:-79 AK159700:-82 AK036461:-89 AK171284:-99 AK152797:-100 AK169450:-100 ENSMUST00000003459.3:-107 ENSMUST00000156878.7:-107 NM_178440:-107 uc007hyt.2:-107 AK088011:-107 AK030825:-107 ENSMUST00000146536.1:-114
+
|all_trans=MGI:1927091
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_178440
 
|nearest_refseq=NM_178440
 
|nearest_unigene=Mm.239554
 
|nearest_unigene=Mm.239554
|num_trans=18
+
|num_trans=246177
 
|species=mouse
 
|species=mouse
 
|start=6520844
 
|start=6520844

Latest revision as of 10:49, 26 July 2021

Basic information about the TSS


TSS ID:mm_100934.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6520844
End:6520851
Strand:-
TSS Score:1
Start of the center position in the TSS region:6520847
End of the center position in the TSS region:6520848



Gene and protein annotation


Transcript_name:ENSMUST00000144725.7
Distance:-46
GeneID:246177
HGNC/MGI_ID:MGI:1927091
UniProt_ID:D6RHL4
Gene_name:myosin IG
Gene_symbol:Myo1g
Gene_synonyms:E430002D17Rik
Gene_source:MGI:1927091



Transcript annotation


Transcript_name:ENSMUST00000144725.7
Distance:-46
Num_trans:246177
All_trans:MGI:1927091



TATA-Box annotation


Distance to TSS:110
Nearest PromoterID:NM_178440
Entrez ID:246177
Nearest Unigene:Mm.239554
Nearest Refseq:NM_178440
Nearest Ensembl:ENSMUSG00000020437
Gene Name:myosin IG
Gene Alias:E430002D17Rik
Gene Description:myosin IG
Gene Type:protein-coding
CpG%:0.015
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):